1. Getting Started

1.1. NWB Widgets

A library of widgets for visualization NWB data in a Jupyter notebook (or lab). The widgets allow you to navigate through the hierarchical structure of the NWB file and visualize specific data elements. It is designed to work out-of-the-box with NWB 2.0 files and to be easy to extend.

1.2. Installation

1. Using Pip:

   $ pip install nwbwidgets
   

2. You can check for any missing packages by explicitly installing from the requirements file:

   $ pip install -r requirements.txt
   

3. Cloning the github repo:

   $ git clone https://github.com/NeurodataWithoutBorders/nwb-jupyter-widgets.git
   $ cd nwb-jupyter-widgets
   $ python setup.py install (or develop)
   

1.3. Usage

from pynwb import NWBHDF5IO
from nwbwidgets import nwb2widget

io = NWBHDF5IO('path/to/file.nwb', mode='r')
nwb = io.read()

nwb2widget(nwb)